The detailed information of tRNA gene sequence


Sequence ID>WENV180096182
Genome IDMTBK01115337
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1475
End posion on genome 1402
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgttgacttc
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGTTAGAGCGCTTCTCTTACACAGAAGAGGTCGCAGGTTCGAG
TCCTGTTCCGCCCAtgc
Downstream region at tRNA end position 
gctgtatgtt
Secondary structure (Cloverleaf model)
>WENV180096182	Val	TAC
                   c      Atgc gctgtatgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T - A
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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