The detailed information of tRNA gene sequence


Sequence ID>WENV180096183
Genome IDMTBK01115643
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 572
End posion on genome 498
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnnncaa
tRNA gene sequence 
GCCCTGTTAGCTCAGTTGGTAGAGCAGCTCCCTCTTAAGGAGATGGTCGGAGGTTCGAAT
CCTCCACGGGGCACCg
Downstream region at tRNA end position 
aaataaaaag
Secondary structure (Cloverleaf model)
>WENV180096183	Lys	CTT
                   a      ACCg aaataaaaag
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     T - A          T A
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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