The detailed information of tRNA gene sequence


Sequence ID>WENV180096187
Genome IDMTBK01115778
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 807
End posion on genome 720
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgctcacgc
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGCGAGGTAT
CGCGGGTTCGAATCCCGCCCTCTCCGCCt
Downstream region at tRNA end position 
cgaccaccca
Secondary structure (Cloverleaf model)
>WENV180096187	Ser	GGA
                   c      GCCt cgaccaccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G C G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TATACCGCGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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