The detailed information of tRNA gene sequence


Sequence ID>WENV180096190
Genome IDMTBK01115840
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3790
End posion on genome 3707
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcagtgataT
tRNA gene sequence 
GCGGATGTGGCGGAATTGGCAGACGCGCACGGTTCAGGTCCGTGTGGGGCAACCTGTGCA
GGTTCAAATCCTGTTATCCGCATta
Downstream region at tRNA end position 
aaaagacagc
Secondary structure (Cloverleaf model)
>WENV180096190	Leu	CAG
                   T      ATta aaaagacagc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGGCAACCTGT
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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