The detailed information of tRNA gene sequence


Sequence ID>WENV180096193
Genome IDMTBK01116134
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 261
End posion on genome 175
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttgcatacat
tRNA gene sequence 
GCCGGAGTGGCGGAATTGGCAGACGCAGCAGACTCAAAATCTGCCGAAGCTTACCCTTCG
TGCCGGTTCAAGTCCGGCCTCCGGCACaa
Downstream region at tRNA end position 
tccggctctt
Secondary structure (Cloverleaf model)
>WENV180096193	Leu	CAA
                   t      ACaa tccggctctt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGAAGCTTACCCTTCGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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