The detailed information of tRNA gene sequence


Sequence ID>WENV180096195
Genome IDMTBK01116177
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 211
End posion on genome 300
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcatcaacc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCCGCCATCCGGCG
GACCGGGGGTTCGAATCCCCCTCTCTCCGCaa
Downstream region at tRNA end position 
acaggtccat
Secondary structure (Cloverleaf model)
>WENV180096195	Ser	CGA
                   c      GCaa acaggtccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCGCCATCCGGCGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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