The detailed information of tRNA gene sequence


Sequence ID>WENV180096205
Genome IDMTBK01116625
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 440
End posion on genome 351
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagtgcattt
tRNA gene sequence 
GGAGAGATGGCCGAGTTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACCTCAAAAGGG
TATCGTGGGTTCGAATCCCACTCTCTCCGCtt
Downstream region at tRNA end position 
gtgttttgaa
Secondary structure (Cloverleaf model)
>WENV180096205	Ser	GGA
                   t      GCtt gtgttttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACCTCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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