The detailed information of tRNA gene sequence


Sequence ID>WENV180096207
Genome IDMTBK01116722
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 295
End posion on genome 219
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aatgcggttt
tRNA gene sequence 
CGGGACGTAGCGCAGTCTGGTAGCGCACCTGAATGGGGTTCAGGGGGTCGGAGGTTCGAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
caatatcccc
Secondary structure (Cloverleaf model)
>WENV180096207	Pro	GGG
                   t      ACCA caatatcccc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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