The detailed information of tRNA gene sequence


Sequence ID>WENV180096208
Genome IDMTBK01116739
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1864
End posion on genome 1953
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcaggctg
tRNA gene sequence 
GGAAGGGTGCCAGAGCGGACGAATGGAGCGGTCTTGAAAACCGTCGAGGGTTTGCGCCCT
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
tcttaagcac
Secondary structure (Cloverleaf model)
>WENV180096208	Ser	TGA
                   g      GCCA tcttaagcac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        A     CGAGGGTTTGCGCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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