The detailed information of tRNA gene sequence


Sequence ID>WENV180096211
Genome IDMTBK01117057
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 90
End posion on genome 163
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agccgctaat
tRNA gene sequence 
GGCGCGTTCGTCTAGCGGTTAGGACGCTGGCCTCTCACGTCAGTAACACGGGTTCGAGTC
CCGTACGCGCTACCt
Downstream region at tRNA end position 
tggatgtgta
Secondary structure (Cloverleaf model)
>WENV180096211	Glu	CTC
                   t      ACCt tggatgtgta
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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