The detailed information of tRNA gene sequence


Sequence ID>WENV180096213
Genome IDMTBK01117066
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 357
End posion on genome 279
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gacatcgggT
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGCTAGAGCGCTTGCTTTGGGAGCAAGAAGTCGCTGGTTCGA
ATCCAGTCACCCCGACCC
Downstream region at tRNA end position 
ggcctctttc
Secondary structure (Cloverleaf model)
>WENV180096213	Pro	TGG
                   T      ACCC ggcctctttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G A C C     A
    T C G A        A      + | | | |     G
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AAGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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