The detailed information of tRNA gene sequence


Sequence ID>WENV180096214
Genome IDMTBK01117074
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 254
End posion on genome 179
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgaagaaagt
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGGAGAGCGGAACGTTCGCAATGTTCAGGCCAGGGGTTCGAAT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
ctttcttttt
Secondary structure (Cloverleaf model)
>WENV180096214	Ala	CGC
                   t      ACCA ctttcttttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    G - C
                    A - T
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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