The detailed information of tRNA gene sequence


Sequence ID>WENV180096222
Genome IDMTBK01117480
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3739
End posion on genome 3655
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtccgtcccg
tRNA gene sequence 
GCCCGAGTGGCGGAATGGCAGACGCGGCGGACTCAAAATCCGCTGTCTTCACGGACGTGT
GGGTTCGAGTCCCACCTCGGGCACCg
Downstream region at tRNA end position 
gagcttcctc
Secondary structure (Cloverleaf model)
>WENV180096222	Leu	CAA
                   g      ACCg gagcttcctc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGTCTTCACGGACGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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