The detailed information of tRNA gene sequence


Sequence ID>WENV180096224
Genome IDMTBK01117706
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 276
End posion on genome 191
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tccgcaatgc
tRNA gene sequence 
GGAGAGGTAGCCTAATTGGTAAGGCAGTAGTCTTGAAAACTACCGCGGGTGACCGCTTGC
AGGTTCGAGTCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
ttctttcctc
Secondary structure (Cloverleaf model)
>WENV180096224	Ser	TGA
                   c      GCCA ttctttcctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       T C C G       G C A G G     C
    G       | | | |                 T T
    G       A G G C
      T A          A     CGCGGGTGACCGCTT
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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