The detailed information of tRNA gene sequence


Sequence ID>WENV180096226
Genome IDMTBK01117733
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2006
End posion on genome 2080
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gactacaacc
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCCAGAGCACCTGCCTTGCACGCAGGGGGTCAAGGGTTCGAA
TCCCTTATTCTCCACaa
Downstream region at tRNA end position 
actaaatcac
Secondary structure (Cloverleaf model)
>WENV180096226	Ala	TGC
                   c      ACaa actaaatcac
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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