The detailed information of tRNA gene sequence


Sequence ID>WENV180096227
Genome IDMTBK01117799
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6860
End posion on genome 6946
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacgcctgcg
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTGAAGGAGCCGGTCTTGAAAACCGGTGACCCGAAAGGGCCG
TGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gcattacagg
Secondary structure (Cloverleaf model)
>WENV180096227	Ser	TGA
                   g      GCCA gcattacagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGACCCGAAAGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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