The detailed information of tRNA gene sequence


Sequence ID>WENV180096228
Genome IDMTBK01117799
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6963
End posion on genome 7056
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caggcagcac
tRNA gene sequence 
GGAGAGATGGCCGAGAGGTCGAAGGCGGTCGCCTGCTAAGCGATTAAGTGGGTTAAAGCC
TGCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caggcgctcg
Secondary structure (Cloverleaf model)
>WENV180096228	Ser	GCT
                   c      GCCA caggcgctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAGTGGGTTAAAGCCTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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