The detailed information of tRNA gene sequence


Sequence ID>WENV180096243
Genome IDMTBK01118935
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 93
End posion on genome 19
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaccgaaat
tRNA gene sequence 
AGGGGAGTGGCTCAATGGTAGAGCAACGGTCTCCAAAACCGTGGGTTGCGGGTTCGAATC
CTGTCTCCCCTGCCA
Downstream region at tRNA end position 
cataagcact
Secondary structure (Cloverleaf model)
>WENV180096243	Trp	CCA
                   t      GCCA cataagcact
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
        A A        G      + | + | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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