The detailed information of tRNA gene sequence


Sequence ID>WENV180096250
Genome IDMTBK01119340
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1019
End posion on genome 945
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
taaatagtaa
tRNA gene sequence 
GCGCTCGTAGCTCAGCGGTTAGAGCATCGCTCTTATAAAGCGGGGGTCGATGGTTCAAAT
CCATCCGGGCGCACCt
Downstream region at tRNA end position 
aggcggggta
Secondary structure (Cloverleaf model)
>WENV180096250	Ile	TAT
                   a      ACCt aggcggggta
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C T A C C     A
      C G A        A      | | | | |     A
    G       C T C G       G A T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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