The detailed information of tRNA gene sequence


Sequence ID>WENV180096259
Genome IDMTBK01119873
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 128
End posion on genome 35
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taatcatagt
tRNA gene sequence 
GGGAGCAGATGGAAGACTGGTGTTGCCCTTGGACTTCAAATCCAATGACAGGCTTAGGGT
CTGTGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position 
taattgaaag
Secondary structure (Cloverleaf model)
>WENV180096259	SeC	TCA
                   t      GCCA taattgaaag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      C A G        T      | | | | |     G
    T       A A G G       G T G G G     C
    G       |   | |                 T T
    G       T G C C
      T G T        C     TGACAGGCTTAGGGTCTGTG
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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