The detailed information of tRNA gene sequence


Sequence ID>WENV180096262
Genome IDMTBK01120002
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 243
End posion on genome 332
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccaaatat
tRNA gene sequence 
GGGTTGTTGGTCGAGTGGTCGATGGCGCTGCGCTTGAAACGCAGAGGGTCTTAACGGGCT
CCGTGGGTTCGAATCCTACACAACCCGCCA
Downstream region at tRNA end position 
ttggataaca
Secondary structure (Cloverleaf model)
>WENV180096262	Ser	TGA
                   t      GCCA ttggataaca
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C T G       G T G G G     C
    G       + | + |                 T T
    T       T G G C
      C G A        G     AGGGTCTTAACGGGCTCC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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