The detailed information of tRNA gene sequence


Sequence ID>WENV180096264
Genome IDMTBK01120035
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 974
End posion on genome 903
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ggggaaatct
tRNA gene sequence 
GGCCCCTTCGTCTATCGGTTAGGACGTAAGATTCTCAATCTTGAAAGAGGGGTTCAATTC
CCCTAGGGGGTGatt
Downstream region at tRNA end position 
ataaaggata
Secondary structure (Cloverleaf model)
>WENV180096264	Glu	CTC
                   t      Gatt ataaaggata
                     G + T
                     G   G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    T + G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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