The detailed information of tRNA gene sequence


Sequence ID>WENV180096268
Genome IDMTBK01120087
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1246
End posion on genome 1320
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gccccggccc
tRNA gene sequence 
GGCGGTGTAGCCGAGTGGCTCAGGCAAGGGTCTGCAAAACCCTGGACGCGGGTTCAATTC
CCGCCACCGCCTCCA
Downstream region at tRNA end position 
gcaggtctcc
Secondary structure (Cloverleaf model)
>WENV180096268	Cys	GCA
                   c      TCCA gcaggtctcc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C G C C C     A
      T G A        A      | | | | |     A
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T C          A     GGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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