The detailed information of tRNA gene sequence


Sequence ID>WENV180096273
Genome IDMTBK01120463
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 474
End posion on genome 548
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgacactctg
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GTCCTCTAGCGCCCAttt
Downstream region at tRNA end position 
tttatgaagt
Secondary structure (Cloverleaf model)
>WENV180096273	Val	CAC
                   g      Attt tttatgaagt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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