The detailed information of tRNA gene sequence


Sequence ID>WENV180096279
Genome IDMTBK01120835
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 213
End posion on genome 288
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgtccttcgt
tRNA gene sequence 
GGGGGGGTAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGTCGGGAGTTCGATC
CTCCTCCTCTCCACCA
Downstream region at tRNA end position 
ccattcagaa
Secondary structure (Cloverleaf model)
>WENV180096279	Ala	CGC
                   t      ACCA ccattcagaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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