The detailed information of tRNA gene sequence


Sequence ID>WENV180096282
Genome IDMTBK01120970
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 242
End posion on genome 152
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccatttccc
tRNA gene sequence 
GGAGAGATGCAGGAGTGGTTGAACTGGCTCGCCTGGAAAGCGAGTATACCCCAAAAGGGT
ATCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
aaagcaaaaa
Secondary structure (Cloverleaf model)
>WENV180096282	Ser	GGA
                   c      GCCA aaagcaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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