The detailed information of tRNA gene sequence


Sequence ID>WENV180096285
Genome IDMTBK01121110
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 635
End posion on genome 562
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gataaactaa
tRNA gene sequence 
GGCGACATAGCCAAGCGGTAAGGCAGAGGTCTGCAAAACCTTTATCCCCGGTTCGAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
aaaaatagtg
Secondary structure (Cloverleaf model)
>WENV180096285	Cys	GCA
                   a      TCCA aaaaatagtg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      C     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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