The detailed information of tRNA gene sequence


Sequence ID>WENV180096286
Genome IDMTBK01121110
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 550
End posion on genome 464
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaatagtgt
tRNA gene sequence 
GCCGGAGTGGTGGAATAGGTAGACACAAGGGACTTAAAATCCCTCGGACTTTTGTCCGTG
CCGGTTCAAGTCCGGCCTCTGGTACCA
Downstream region at tRNA end position 
ttgcgggaat
Secondary structure (Cloverleaf model)
>WENV180096286	Leu	TAA
                   t      ACCA ttgcgggaat
                     G + T
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    A       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGACTTTTGTCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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