The detailed information of tRNA gene sequence


Sequence ID>WENV180096288
Genome IDMTBK01121112
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 220
End posion on genome 149
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aatttataaa
tRNA gene sequence 
GGGCTGGTAGGTAAATGGCATACCACGGCATTCGCATTGCCGAATTCCGGGTTCGATTCC
CGGTCAGTCCACta
Downstream region at tRNA end position 
acaaaatctc
Secondary structure (Cloverleaf model)
>WENV180096288	Ala	CGC
                   a      ACta acaaaatctc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     G G C C C     A
        A A        A      | | | | |     G
      T     A T G G       C C G G G     C
      G     | | | |                 T T
      G     T A C C
        C A        A     AATT
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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