The detailed information of tRNA gene sequence


Sequence ID>WENV180096293
Genome IDMTBK01121661
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1069
End posion on genome 993
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaaagacac
tRNA gene sequence 
GGGCTTATAGCTCAGGTGGCTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACCTAAGCCCACCA
Downstream region at tRNA end position 
tttgcatcgg
Secondary structure (Cloverleaf model)
>WENV180096293	Ile	GAT
                   c      ACCA tttgcatcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T G
                    T     C C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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