The detailed information of tRNA gene sequence


Sequence ID>WENV180096295
Genome IDMTBK01121681
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 570
End posion on genome 642
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccctggcgt
tRNA gene sequence 
GGGCGATTAGCTCAGGGGGAGAGCGCTGTCTTCACACGGCAGAAGTCGCTGGTTCAAATC
CAGCATCGCCCACtt
Downstream region at tRNA end position 
cgccgttagg
Secondary structure (Cloverleaf model)
>WENV180096295	Val	CAC
                   t      ACtt cgccgttagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C G A C C     A
        G A        A      | | | | |     A
      G     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AAGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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