The detailed information of tRNA gene sequence


Sequence ID>WENV180096300
Genome IDMTBK01122039
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 7609
End posion on genome 7523
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcctgttt
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGAGAGGTAT
CAAGGGTTCGAATCCCTTCCTCTCCGCtg
Downstream region at tRNA end position 
aagaacctgc
Secondary structure (Cloverleaf model)
>WENV180096300	Ser	GGA
                   t      GCtg aagaacctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       A A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATACCGAGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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