The detailed information of tRNA gene sequence


Sequence ID>WENV180096305
Genome IDMTBK01122389
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 509
End posion on genome 595
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgtcttttg
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTTAAGGAGCTAGTCTTGAAAACTAGTGACCCGAAAGGGCCG
TGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gcagacacga
Secondary structure (Cloverleaf model)
>WENV180096305	Ser	TGA
                   g      GCCA gcagacacga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACCCGAAAGGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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