The detailed information of tRNA gene sequence


Sequence ID>WENV180096315
Genome IDMTBK01123066
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 497
End posion on genome 422
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatcaagaat
tRNA gene sequence 
GGGGTCGTGGCGCAGTTGGGAGCGCGCTACCATGGCACGGTAGAGGTCGTGGGTTCAAGT
CCCATCGACTCCACCA
Downstream region at tRNA end position 
atcgagggag
Secondary structure (Cloverleaf model)
>WENV180096315	Ala	GGC
                   t      ACCA atcgagggag
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        G      + | | | |     A
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  A       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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