The detailed information of tRNA gene sequence


Sequence ID>WENV180096318
Genome IDMTBK01123270
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 170
End posion on genome 247
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagtcttgct
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGAAGGTTCGA
ATCCTTTCGCCCCGACCA
Downstream region at tRNA end position 
tttgaatgcc
Secondary structure (Cloverleaf model)
>WENV180096318	Pro	TGG
                   t      ACCA tttgaatgcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G A A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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