The detailed information of tRNA gene sequence


Sequence ID>WENV180096324
Genome IDMTBK01123334
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 299
End posion on genome 227
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cttagttaat
tRNA gene sequence 
GGTCCCTTCGTCTAGTGGTCAGGACACCAGGTTTTCATCCTGATAACAGGGGTTCGATTC
CCCTAGGGACTACaa
Downstream region at tRNA end position 
aaattgtttt
Secondary structure (Cloverleaf model)
>WENV180096324	Glu	TTC
                   t      ACaa aaattgtttt
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          A     TAAC
                    C   A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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