The detailed information of tRNA gene sequence


Sequence ID>WENV180096329
Genome IDMTBK01123947
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 375
End posion on genome 467
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acgcacaccc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGCGCCGACTCGAAATCGGATGGTCGGTTAATCCC
GGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttctgatc
Secondary structure (Cloverleaf model)
>WENV180096329	Ser	CGA
                   c      GCCA ttttctgatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGTCGGTTAATCCCGGCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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