The detailed information of tRNA gene sequence


Sequence ID>WENV180096330
Genome IDMTBK01123977
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 187
End posion on genome 264
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgaaccaagt
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTCAGCGCGCTCGGTTCGGGACCGAGAGGTCGGAGGTTCAA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
tggttttttt
Secondary structure (Cloverleaf model)
>WENV180096330	Pro	CGG
                   t      ACCA tggttttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T C A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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