The detailed information of tRNA gene sequence


Sequence ID>WENV180096336
Genome IDMTBK01124167
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 503
End posion on genome 416
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttcacaatat
tRNA gene sequence 
GCCGAAGTGGTGAAATAGGTAGACGCAGTGGACTCAAAATCCACCGGGCTTTTAGCCCGT
GCCGGTTCGATTCCGGCCTTCGGCACCA
Downstream region at tRNA end position 
ttaactaagt
Secondary structure (Cloverleaf model)
>WENV180096336	Leu	CAA
                   t      ACCA ttaactaagt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    A       A G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGGCTTTTAGCCCGT
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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