The detailed information of tRNA gene sequence


Sequence ID>WENV180096337
Genome IDMTBK01124215
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 155
End posion on genome 82
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ataataaagc
tRNA gene sequence 
CGGGGTGTAGCGCAGCCAGGTAGCGCACACGACTGGGGGTCGTGTGGTCGCAGGTTCAAA
TCCTGTCACCCCGAata
Downstream region at tRNA end position 
aaaagcctct
Secondary structure (Cloverleaf model)
>WENV180096337	Pro	GGG
                   c      Aata aaaagcctct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G C A G G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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