The detailed information of tRNA gene sequence


Sequence ID>WENV180096339
Genome IDMTBK01124422
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 463
End posion on genome 538
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tacatatccc
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGGTTGGTTCGCAATCAACAGGTCAGGGGTTCGATC
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
tttttatcca
Secondary structure (Cloverleaf model)
>WENV180096339	Ala	CGC
                   c      ACCA tttttatcca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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