The detailed information of tRNA gene sequence


Sequence ID>WENV180096341
Genome IDMTBK01124750
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 836
End posion on genome 740
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgagattct
tRNA gene sequence 
GGAGAGGTGGCAGAGCCCGGTTGAATGCACTCGATTCGAAATCGAGCAGGGGGACTAATC
ATCTTCCTCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gagagctgtt
Secondary structure (Cloverleaf model)
>WENV180096341	Ser	CGA
                   t      GCCA gagagctgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     CAGGGGGACTAATCATCTTCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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