The detailed information of tRNA gene sequence


Sequence ID>WENV180096348
Genome IDMTBK01125084
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2395
End posion on genome 2483
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcatatctc
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGATTGGGGCCGCCTGCTAAGTGGTTGTCGGGTCAAACCGA
CCCAGGGTTCGAATCCCTGCCTCTCCGCCt
Downstream region at tRNA end position 
acaagaccgc
Secondary structure (Cloverleaf model)
>WENV180096348	Ser	GCT
                   c      GCCt acaagaccgc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTCGGGTCAAACCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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