The detailed information of tRNA gene sequence


Sequence ID>WENV180096353
Genome IDMTBK01125240
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5569
End posion on genome 5656
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgcagatag
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGACCCGCAAGGGTCC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cccaaaaaca
Secondary structure (Cloverleaf model)
>WENV180096353	Ser	TGA
                   g      GCCA cccaaaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACCCGCAAGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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