The detailed information of tRNA gene sequence


Sequence ID>WENV180096356
Genome IDMTBK01125369
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 723
End posion on genome 646
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaatgcgct
tRNA gene sequence 
GGGGGCGTAGTTCAGTTTGGTTAGAACGTCTGCCTGTCACGCAGAAGGCCGCGAGTTCGA
GTCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ttttcaaaag
Secondary structure (Cloverleaf model)
>WENV180096356	Asp	GTC
                   t      GCCA ttttcaaaag
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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