The detailed information of tRNA gene sequence


Sequence ID>WENV180096357
Genome IDMTBK01125478
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1320
End posion on genome 1245
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ataagagtaa
tRNA gene sequence 
GGGGGATTAGCTCATCTGGTAGAGCGTTTGACTGGCAGTCAAAAGGTAATCGGTTCGAGT
CCGATATTCTCCACCA
Downstream region at tRNA end position 
actaaaatta
Secondary structure (Cloverleaf model)
>WENV180096357	Ala	GGC
                   a      ACCA actaaaatta
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T G
                    T     T A G C C     A
      C T A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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