The detailed information of tRNA gene sequence


Sequence ID>WENV180096366
Genome IDMTBK01126039
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4332
End posion on genome 4259
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aacgatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTCAGTTCGAAT
CTGGCCCCCGCTACta
Downstream region at tRNA end position 
aacagggaaa
Secondary structure (Cloverleaf model)
>WENV180096366	fMet	CAT
                   t      ACta aacagggaaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      T G A        G      | + | | |     G
    T       C G A G       G T C A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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