The detailed information of tRNA gene sequence


Sequence ID>WENV180096373
Genome IDMTBK01126579
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4314
End posion on genome 4389
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
acgcagttgc
tRNA gene sequence 
GGCCAGGTAGCTCAGTTGGTAGAGCAGCGGACTGAAAATCCGCGTGTCGGCGGTTCGATC
CCGTCCCTGGCCACCA
Downstream region at tRNA end position 
ttctcctcgg
Secondary structure (Cloverleaf model)
>WENV180096373	Phe	GAA
                   c      ACCA ttctcctcgg
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          C T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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