The detailed information of tRNA gene sequence


Sequence ID>WENV180096376
Genome IDMTBK01126579
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 276271
End posion on genome 276182
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtatcgcgc
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCAGTCTCGAAAATTGTTGTACCTTTACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
caaaacaaat
Secondary structure (Cloverleaf model)
>WENV180096376	Ser	CGA
                   c      GCCA caaaacaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTACCTTTACGGGTACC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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