The detailed information of tRNA gene sequence


Sequence ID>WENV180096377
Genome IDMTBK01126579
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 275235
End posion on genome 275146
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcgttttgc
tRNA gene sequence 
GGAAAGGTGCAGGAGTGGTTGAACTGGCAGCATTGGAAATGCTGTGAGCCTTAACGGGTT
CCGTGGGTTCGAATCCCACCCTTTCCGCCA
Downstream region at tRNA end position 
tgtggcttca
Secondary structure (Cloverleaf model)
>WENV180096377	Ser	GGA
                   c      GCCA tgtggcttca
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G T G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TGAGCCTTAACGGGTTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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